Information for 6-GGCAGGAGTCCAA (Motif 16)

A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T A C T G A T C G G C T A A G T C A C G T G T A C A G T C A G C T A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 22.6bp
Average Position of motif in Background58.2 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGAGTCCAA
TGGCACCATGCCAA
 A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGAGTCCAA
TGGCAGNCTGCCAG
 A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGGAGTCCAA-
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGAGTCCAA
GGGCGGGAAGG---
 A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGAGTCCAA
GGGCGGGAAGG---
 A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCAGGAGTCCAA
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAGGAGTCCAA
GGCGGGAARN---
 A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGAGTCCAA
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGGAGTCCAA--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGAGTCCAA
TGGCGGGAAAHB--
 A C G T A C T G A C T G G T A C C T G A A C T G A C T G C G T A C T A G C A G T A T G C A G T C G T C A C T G A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T