p-value: | 1e-11 |
log p-value: | -2.587e+01 |
Information Content per bp: | 1.878 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.4 +/- 21.5bp |
Average Position of motif in Background | 43.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT--- ---AGAGCCATAAAATTCG |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT---- ---ACGGCCATAAAATTAAT |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT--- ---CTACCAATAAAATTCT |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT ------GTCATAAAAN |
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CDX2/MA0465.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT ----AAGCCATAAAA- |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT -----NCYAATAAAA- |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT ------CCAATAAAAA |
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CDX1/MA0878.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT ------GCAATAAAA- |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT -----GGTAATAAAAA |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCACAGATATAAAAT-- --AAAGGTAATAAAATTT |
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