Information for 4-CACCAGCATAGGA (Motif 10)

G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C C A G T G T C A C G A T A C T G A T G C A C G T C T A G A T C G C A G T A C T G
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.7 +/- 28.0bp
Average Position of motif in Background66.2 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACCAGCATAGGA
TACCCGCATN---
 G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGCATAGGA
GTACCCGCATN---
 A C G T G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCAGCATAGGA
-CACAGCAGGGGG
 G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCAGCATAGGA
-ANCAGCTG----
 G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACCAGCATAGGA
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACCAGCATAGGA
---CAGCC-----
 G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACCAGCATAGGA--------
-GCCASCAGGGGGCGCYVNNG
 G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CACCAGCATAGGA
SNGCACCTGCHS----
 A C G T A C G T A C G T G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGCATAGGA
GGCTCYAKCAYC---
 A C G T A C G T G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACCAGCATAGGA-----
TGGCCACCAGGGGGCGCTA
 A C G T G T A C G C T A A T G C A G T C C G T A A T C G A G T C C G T A A C G T G C T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A