Information for 13-CCACACGTGTGGG (Motif 22)

A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
Reverse Opposite:
A G T C A G T C A G T C G T C A A G T C C T G A A G T C C T A G A C G T A C T G A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.851
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 17.1bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas2/MA0626.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCACACGTGTGGG
-GGCACGTGTC--
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCACACGTGTGGG
--GCACGTGT---
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCACACGTGTGGG
---CACGTGBN--
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCACACGTGTGGG
-AACACGTGTT--
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCACACGTGTGGG
-ACCATATGTT--
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCACACGTGTGGG
---CACGTG----
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCACACGTGTGGG
---CACGTGNC--
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACACGTGTGGG--
ATCCACAGGTGCGAAAA
 A C G T A C G T A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCACACGTGTGGG
-NCCACGTG----
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCACACGTGTGGG
---CAGGTGAGG-
 A G T C A G T C G T C A A G T C C G T A A G T C C T A G A G C T A C T G A C G T A C T G A C T G T C A G
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T