Information for 11-TTGTGAGTGCTCT (Motif 20)

A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C C G T A G T C A
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 26.7bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT
--TTAAGTGCTT-
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGTGAGTGCTCT----
CGAACAGTGCTCACTAT
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT
-RGTTAGTGCCCY
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT
--TTGAGTGSTT-
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT
-CTTGAGTGGCT-
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT----
NTNTATGTGCACATNNN
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGTGAGTGCTCT
-CGTGGGTGGTCC
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGTGAGTGCTCT
--TTRAGTGSYK-
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGTGAGTGCTCT----
NNGTATGTGCACATNNN
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGAGTGCTCT-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T