Information for 8-AGGTGAGCGA (Motif 18)

C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
Reverse Opposite:
A C G T A G T C A C T G G T A C A C G T A T G C C G T A A G T C A G T C A G C T
p-value:1e-7
log p-value:-1.783e+01
Information Content per bp:1.865
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif177.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets41.8 +/- 25.2bp
Average Position of motif in Background51.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGAGCGA
CAGGTGAGG--
 A C G T C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGTGAGCGA
CAGGTAAGTAT
 A C G T C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGGTGAGCGA---
AGGTGNCAGACAG
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGAGCGA
NNCAGGTGNN---
 A C G T A C G T A C G T C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA
AGGTGTGA--
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA--
AGGTGHCAGACA
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA
AGGTGTGA--
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA
AGGTGTGA--
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA
AGGTGTGA--
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGTGAGCGA
AGGTGTCA--
 C T G A A C T G A C T G C G A T A T C G C G T A A C T G T G A C A C T G T G C A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T