Information for 7-GGTGCAGAACACA (Motif 13)

A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C G T G T A C A C G T A C T G A G T C C G T A A T G C A G T C
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 26.4bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGTGCAGAACACA---
----NWAACCACADNN
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGTGCAGAACACA-
----NAAACCACAG
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGTGCAGAACACA---
-----AAACCACAGAN
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGTGCAGAACACA--
-----AAACCACAGC
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTGCAGAACACA-----
--AGCGGCACACACGCAA
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGTGCAGAACACA--
-----AAACCACANN
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTGCAGAACACA---
AACACCAAAACAAAGGA
 A C G T A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTGCAGAACACA-----
--CGAAGCACACAAAATA
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCAGAACACA--
NNGATCTAGAACCTNNN
 A C G T A C G T A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGTGCAGAACACA
-ATGCATAATTCA
 A C T G A T C G A C G T A C T G G T A C C G T A A C T G C G T A G T C A A G T C C G T A A G T C C G T A
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A