Information for 4-CCTTAGCWRGTGAAGT (Motif 8)

G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
Reverse Opposite:
C T G A G A T C A C G T A C G T G T A C C G T A G T A C A G C T C G A T A C T G A G T C A C G T T G C A C G T A C T A G A C T G
p-value:1e-13
log p-value:-3.215e+01
Information Content per bp:1.726
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 25.9bp
Average Position of motif in Background32.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCTTAGCWRGTGAAGT
----ACCACGTG----
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGCWRGTGAAGT
GANGTTAACTAGTTTNN-
 A C G T A C G T G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTTAGCWRGTGAAGT
-CACAGCAGGGGG---
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTTAGCWRGTGAAGT
NCCTTATCTG-------
 A C G T G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCTTAGCWRGTGAAGT
----AACAGGTGT---
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCTTAGCWRGTGAAGT
-----GCACGTGA---
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCTTAGCWRGTGAAGT
---SDGCAGGTGCNS-
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCTTAGCWRGTGAAGT
YCTTATCTBN------
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTTAGCWRGTGAAGT
YCTTATCWVN------
 G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTTAGCWRGTGAAGT
NNCTTATCTN-------
 A C G T G T A C G A T C C G A T A C G T C G T A C T A G A G T C G C T A T C G A A C T G G C A T C A T G G T C A C G T A C A T G A G C T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T