Information for 10-TTGGCAMATTGTA (Motif 7)

A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
Reverse Opposite:
A C G T C T G A A T G C C G T A C G T A A C G T A C T G A C G T A C T G G A T C A G T C C G T A G T C A
p-value:1e-13
log p-value:-3.215e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 16.2bp
Average Position of motif in Background24.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAMATTGTA
NNTTGGCANN-----
 A C G T A C G T A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAMATTGTA
CTTGGCAA------
 A C G T A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAMATTGTA
NTTGGCANN-----
 A C G T A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTGGCAMATTGTA
TTGGCA-------
 A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAMATTGTA
GGTTGGCAT------
 A C G T A C G T A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAMATTGTA
ARNTGACA-------
 A C G T A C G T A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGGCAMATTGTA
TTMACACCTT---
 A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGGCAMATTGTA-
TTGGCATGGTGCCA
 A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCAMATTGTA--
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGGCAMATTGTA--
YDGHTACAWTGTADC
 A C G T A C G T A C T G C A T G A G T C C G T A G T A C C G T A G A C T A C G T A T C G A G C T G T C A A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C