Information for 6-GTACGTTGTGTCTTAT (Motif 20)

A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C T G C G T A A G T C C G T A A T G C G C T A C G T A A T G C A C T G A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 19.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTACGTTGTGTCTTAT--
----NNTTTTTCTTATNT
 A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTACGTTGTGTCTTAT
VAGRACAKWCTGTYC---
 A C G T A C G T A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTACGTTGTGTCTTAT
GGGAACATTGTGTTCCC-
 A C G T A C G T A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTACGTTGTGTCTTAT--
-TNNNNGGTGTCATNTNT
 A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTACGTTGTGTCTTAT---------
---NNTNANTTCTTATCTCTANANN
 A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTACGTTGTGTCTTAT
NAGNACANNNTGTNCT--
 A C G T A C G T A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTACGTTGTGTCTTAT
GGGTACATAATGTTCCC-
 A C G T A C G T A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTACGTTGTGTCTTAT
VAGRACAKNCTGTBC---
 A C G T A C G T A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTACGTTGTGTCTTAT
GAACADWATGTTCTT-
 A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GTACGTTGTGTCTTAT---
-----TNTTATCTTATCTT
 A C T G A C G T C G T A A G T C A T C G A C G T C A G T A T C G A C G T A C T G A C G T A G T C C G A T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T