Information for 14-CAGAGCACGTCTC (Motif 15)

A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A G T A C A C T G A C G T A C T G A G T C A G C T A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.815
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.9 +/- 22.9bp
Average Position of motif in Background43.1 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGCACGTCTC-----
NDBAGATRWTATCTVNNNNN
 A C G T A C G T A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGCACGTCTC
ATGCCAGACN-------
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
----GCACGTAY-
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC----
----GCACGTGTCNNNN
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGAGCACGTCTC-
----GCACGTACCC
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
---GGCACGTGNC
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
----GCACGTNC-
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGAGCACGTCTC
-AGAGGAAGTG--
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGAGCACGTCTC
---GGCACGTGTC
 A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGCACGTCTC
CACAGN---------
 A C G T A C G T A G T C C G T A A C T G C T G A T A C G G T A C G T C A G T A C C A T G A C G T G T A C C G A T A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T