Information for 5-AGCACACATTANSCWC (Motif 13)

G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G A T G C A C G T A C G T C T G A G T C A A G C T A C T G C G A T A C T G C G A T C T A G A G T C C A G T
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.775
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 23.5bp
Average Position of motif in Background20.4 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCACACATTANSCWC
CGAAGCACACAAAATA---
 A C G T A C G T A C G T G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCACACATTANSCWC
AGCGGCACACACGCAA---
 A C G T A C G T A C G T G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCACACATTANSCWC
NNNACCTCATTATCNTN
 A C G T G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCACACATTANSCWC
--AGCTCATTAT----
 G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AGCACACATTANSCWC
NNNVCTGWGYAAACASN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGCACACATTANSCWC
---GCTAATTAGC---
 G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGCACACATTANSCWC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCACACATTANSCWC--
--TACCCACAATGCATTG
 G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCACACATTANSCWC
AGNACANNNTGTNCTN
 G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGCACACATTANSCWC
ATTTCCCAGVAKSCY-
 G C T A A C T G G A T C C G T A A G T C C G T A G T A C C T G A A C G T A G C T C G T A G T C A T A C G A G T C C G T A A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T