Information for 12-AAACAATGASTAT (Motif 12)

C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A T G C A G C T G T A C C G T A A C G T C G A T T A C G A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 23.4bp
Average Position of motif in Background54.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAACAATGASTAT
RAACAATGGN---
 C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGASTAT
AAAACAATGG----
 A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGASTAT
VRAACAATGG----
 A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAACAATGASTAT
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAACAATGASTAT
NAACAAT------
 C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAACAATGASTAT-
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAACAATGASTAT
GAACAATGGN---
 C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAACAATGASTAT
GTAAACAAT------
 A C G T A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGASTAT
VRRACAAWGG----
 A C G T C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAACAATGASTAT
GAACAATGG----
 C G T A C G T A C G T A A G T C C G T A G T C A C G A T A C T G C T G A T A C G A C G T C G T A A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T