Information for 11-CAGTCCCTCCTGK (Motif 11)

G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
Reverse Opposite:
G T C A A T G C G T C A C A T G T A C G C G T A C A T G C T A G C T A G C G T A G T A C C G A T A C T G
p-value:1e-12
log p-value:-2.879e+01
Information Content per bp:1.697
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif280.1
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets51.7 +/- 23.9bp
Average Position of motif in Background52.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK-
--CCCCCTGCTGTG
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK
-ACTTCCTGNT--
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK
CACTTCCTCT---
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK----
--TNTCCTGCTGTGNNG
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK----
--TCNCCTGCTGNGNNN
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGTCCCTCCTGK--
-----CCTGCTGAGH
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK----
--NNTCCTGCTGTGNNN
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK
CACTTCCYCTTT-
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK
-ACTTCCTGBT--
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGTCCCTCCTGK
-ACTTCCTBGT--
 G T A C C G T A A C T G G C A T G A T C A G T C G A T C A C G T A T G C G T A C A C G T A T C G C A G T
A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T A C G T