Information for 1-GWACABWNTGTTCYTK (Motif 1)

C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
Reverse Opposite:
G T C A T G C A C T G A C T A G C G T A C G T A A T G C C G T A A C T G G C T A T A G C G C A T T A C G G A C T C G A T G A T C
p-value:1e-195
log p-value:-4.497e+02
Information Content per bp:1.499
Number of Target Sequences with motif399.0
Percentage of Target Sequences with motif51.62%
Number of Background Sequences with motif4199.7
Percentage of Background Sequences with motif9.37%
Average Position of motif in Targets51.8 +/- 22.1bp
Average Position of motif in Background50.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GWACABWNTGTTCYTK
GVACAGNMTGTYCTB-
 C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GWACABWNTGTTCYTK
GRACAGWMTGTYCTB-
 C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GWACABWNTGTTCYTK
GAACADWATGTTCTT-
 C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GWACABWNTGTTCYTK
AGNACAGNCTGTTCTN-
 A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-GWACABWNTGTTCYTK
AGNACANNNTGTNCTN-
 A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--GWACABWNTGTTCYTK
NGGAACATNATGTACCC-
 A C G T A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GWACABWNTGTTCYTK
GGGAACACAATGTTCCC-
 A C G T A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GWACABWNTGTTCYTK
GGGAACACGGTGTACCC-
 A C G T A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GWACABWNTGTTCYTK
CCAGGAACAG----------
 A C G T A C G T A C G T A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GWACABWNTGTTCYTK
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T C T A G G C T A C T G A A T G C C G T A A T C G C G A T T G A C G C A T T A C G G C A T G C A T G A T C G A C T A C G T C A G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T