Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-140 | -3.246e+02 | 0.0000 | 374.0 | 51.09% | 5623.4 | 12.39% | motif file (matrix) |
svg |
2 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-99 | -2.287e+02 | 0.0000 | 123.0 | 16.80% | 519.5 | 1.14% | motif file (matrix) |
svg |
3 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-92 | -2.126e+02 | 0.0000 | 116.0 | 15.85% | 502.4 | 1.11% | motif file (matrix) |
svg |
4 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-85 | -1.974e+02 | 0.0000 | 121.0 | 16.53% | 651.2 | 1.43% | motif file (matrix) |
svg |
5 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-70 | -1.633e+02 | 0.0000 | 79.0 | 10.79% | 263.6 | 0.58% | motif file (matrix) |
svg |
6 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-53 | -1.232e+02 | 0.0000 | 345.0 | 47.13% | 9670.8 | 21.30% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-43 | -1.003e+02 | 0.0000 | 188.0 | 25.68% | 3790.0 | 8.35% | motif file (matrix) |
svg |
8 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-39 | -9.124e+01 | 0.0000 | 160.0 | 21.86% | 3031.5 | 6.68% | motif file (matrix) |
svg |
9 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-38 | -8.925e+01 | 0.0000 | 159.0 | 21.72% | 3047.6 | 6.71% | motif file (matrix) |
svg |
10 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-37 | -8.659e+01 | 0.0000 | 152.0 | 20.77% | 2872.8 | 6.33% | motif file (matrix) |
svg |
11 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-37 | -8.530e+01 | 0.0000 | 139.0 | 18.99% | 2465.0 | 5.43% | motif file (matrix) |
svg |
12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-25 | -5.870e+01 | 0.0000 | 71.0 | 9.70% | 942.1 | 2.08% | motif file (matrix) |
svg |
13 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-22 | -5.120e+01 | 0.0000 | 30.0 | 4.10% | 149.3 | 0.33% | motif file (matrix) |
svg |
14 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-19 | -4.386e+01 | 0.0000 | 117.0 | 15.98% | 2889.3 | 6.36% | motif file (matrix) |
svg |
15 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-17 | -3.986e+01 | 0.0000 | 109.0 | 14.89% | 2726.2 | 6.01% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-13 | -3.052e+01 | 0.0000 | 113.0 | 15.44% | 3308.8 | 7.29% | motif file (matrix) |
svg |
17 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-12 | -2.950e+01 | 0.0000 | 102.0 | 13.93% | 2887.0 | 6.36% | motif file (matrix) |
svg |
18 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-12 | -2.907e+01 | 0.0000 | 95.0 | 12.98% | 2613.3 | 5.76% | motif file (matrix) |
svg |
19 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-12 | -2.845e+01 | 0.0000 | 93.0 | 12.70% | 2558.3 | 5.64% | motif file (matrix) |
svg |
20 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.280e+01 | 0.0000 | 29.0 | 3.96% | 417.3 | 0.92% | motif file (matrix) |
svg |
21 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-9 | -2.163e+01 | 0.0000 | 56.0 | 7.65% | 1363.9 | 3.00% | motif file (matrix) |
svg |
22 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-9 | -2.110e+01 | 0.0000 | 58.0 | 7.92% | 1462.0 | 3.22% | motif file (matrix) |
svg |
23 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-7 | -1.836e+01 | 0.0000 | 59.0 | 8.06% | 1620.5 | 3.57% | motif file (matrix) |
svg |
24 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-7 | -1.657e+01 | 0.0000 | 197.0 | 26.91% | 8561.4 | 18.86% | motif file (matrix) |
svg |
25 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-6 | -1.539e+01 | 0.0000 | 70.0 | 9.56% | 2254.2 | 4.97% | motif file (matrix) |
svg |
26 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-6 | -1.538e+01 | 0.0000 | 63.0 | 8.61% | 1944.6 | 4.28% | motif file (matrix) |
svg |
27 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.531e+01 | 0.0000 | 64.0 | 8.74% | 1992.2 | 4.39% | motif file (matrix) |
svg |
28 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.519e+01 | 0.0000 | 50.0 | 6.83% | 1399.2 | 3.08% | motif file (matrix) |
svg |
29 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 54.0 | 7.38% | 1593.3 | 3.51% | motif file (matrix) |
svg |
30 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.446e+01 | 0.0000 | 134.0 | 18.31% | 5450.6 | 12.01% | motif file (matrix) |
svg |
31 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-6 | -1.395e+01 | 0.0000 | 69.0 | 9.43% | 2301.3 | 5.07% | motif file (matrix) |
svg |
32 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.261e+01 | 0.0000 | 64.0 | 8.74% | 2162.1 | 4.76% | motif file (matrix) |
svg |
33 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.237e+01 | 0.0000 | 11.0 | 1.50% | 116.8 | 0.26% | motif file (matrix) |
svg |
34 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.208e+01 | 0.0001 | 17.0 | 2.32% | 283.7 | 0.62% | motif file (matrix) |
svg |
35 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.186e+01 | 0.0001 | 92.0 | 12.57% | 3569.6 | 7.86% | motif file (matrix) |
svg |
36 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.102e+01 | 0.0002 | 28.0 | 3.83% | 700.5 | 1.54% | motif file (matrix) |
svg |
37 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.093e+01 | 0.0002 | 98.0 | 13.39% | 3961.6 | 8.73% | motif file (matrix) |
svg |
38 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.066e+01 | 0.0002 | 69.0 | 9.43% | 2544.2 | 5.60% | motif file (matrix) |
svg |
39 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -9.670e+00 | 0.0006 | 70.0 | 9.56% | 2678.5 | 5.90% | motif file (matrix) |
svg |
40 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.997e+00 | 0.0011 | 58.0 | 7.92% | 2151.6 | 4.74% | motif file (matrix) |
svg |
41 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.408e+00 | 0.0020 | 20.0 | 2.73% | 495.5 | 1.09% | motif file (matrix) |
svg |
42 |
| HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-3 | -8.369e+00 | 0.0020 | 16.0 | 2.19% | 348.7 | 0.77% | motif file (matrix) |
svg |
43 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -8.353e+00 | 0.0020 | 49.0 | 6.69% | 1773.0 | 3.91% | motif file (matrix) |
svg |
44 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -8.279e+00 | 0.0021 | 95.0 | 12.98% | 4100.4 | 9.03% | motif file (matrix) |
svg |
45 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.184e+00 | 0.0023 | 46.0 | 6.28% | 1643.9 | 3.62% | motif file (matrix) |
svg |
46 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.068e+00 | 0.0025 | 48.0 | 6.56% | 1747.1 | 3.85% | motif file (matrix) |
svg |
47 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -7.904e+00 | 0.0029 | 101.0 | 13.80% | 4465.2 | 9.84% | motif file (matrix) |
svg |
48 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.846e+00 | 0.0030 | 15.0 | 2.05% | 329.8 | 0.73% | motif file (matrix) |
svg |
49 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -7.784e+00 | 0.0031 | 65.0 | 8.88% | 2608.1 | 5.74% | motif file (matrix) |
svg |
50 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -7.700e+00 | 0.0033 | 79.0 | 10.79% | 3333.8 | 7.34% | motif file (matrix) |
svg |
51 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.206e+00 | 0.0053 | 50.0 | 6.83% | 1917.7 | 4.22% | motif file (matrix) |
svg |
52 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -7.072e+00 | 0.0059 | 39.0 | 5.33% | 1398.8 | 3.08% | motif file (matrix) |
svg |
53 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.841e+00 | 0.0073 | 102.0 | 13.93% | 4665.3 | 10.28% | motif file (matrix) |
svg |
54 |
| ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.724e+00 | 0.0081 | 19.0 | 2.60% | 527.9 | 1.16% | motif file (matrix) |
svg |
55 |
| ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.627e+00 | 0.0088 | 5.0 | 0.68% | 49.5 | 0.11% | motif file (matrix) |
svg |
56 |
| PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-2 | -6.304e+00 | 0.0119 | 14.0 | 1.91% | 346.4 | 0.76% | motif file (matrix) |
svg |
57 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -6.194e+00 | 0.0130 | 18.0 | 2.46% | 511.2 | 1.13% | motif file (matrix) |
svg |
58 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -6.053e+00 | 0.0148 | 67.0 | 9.15% | 2904.7 | 6.40% | motif file (matrix) |
svg |
59 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.954e+00 | 0.0160 | 46.0 | 6.28% | 1837.7 | 4.05% | motif file (matrix) |
svg |
60 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -5.877e+00 | 0.0170 | 8.0 | 1.09% | 145.3 | 0.32% | motif file (matrix) |
svg |
61 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.221e+00 | 0.0322 | 12.0 | 1.64% | 311.7 | 0.69% | motif file (matrix) |
svg |
62 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.049e+00 | 0.0377 | 14.0 | 1.91% | 400.6 | 0.88% | motif file (matrix) |
svg |
63 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.017e+00 | 0.0383 | 201.0 | 27.46% | 10647.9 | 23.45% | motif file (matrix) |
svg |
64 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.012e+00 | 0.0383 | 76.0 | 10.38% | 3528.8 | 7.77% | motif file (matrix) |
svg |
65 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -4.848e+00 | 0.0439 | 29.0 | 3.96% | 1100.5 | 2.42% | motif file (matrix) |
svg |
66 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.816e+00 | 0.0447 | 7.0 | 0.96% | 139.7 | 0.31% | motif file (matrix) |
svg |
67 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.793e+00 | 0.0450 | 47.0 | 6.42% | 2014.5 | 4.44% | motif file (matrix) |
svg |