Information for 4-RGGAACADTCCMT (Motif 7)

C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
Reverse Opposite:
G C T A C A G T C T A G T A C G C G T A G A C T A C G T A T C G A C G T A C G T A G T C G A T C G A C T
p-value:1e-17
log p-value:-4.118e+01
Information Content per bp:1.673
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif311.4
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets44.8 +/- 23.1bp
Average Position of motif in Background51.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--RGGAACADTCCMT
CCAGGAACAG-----
 A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---RGGAACADTCCMT-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RGGAACADTCCMT-
TTAAGAACAATAAATT
 A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:RGGAACADTCCMT
--NAACAAT----
 C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:RGGAACADTCCMT
---CACATTCCAT
 C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:RGGAACADTCCMT
---CACATTCCAT
 C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RGGAACADTCCMT--
TNNAGAACAATANATNN
 A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---RGGAACADTCCMT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RGGAACADTCCMT
---AACAAT----
 C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RGGAACADTCCMT-
TTTAGAACAATAAAAT
 A C G T A C G T C T A G C T A G C T A G T G C A C G T A A T G C C G T A C T G A A C G T A T G C A G T C G T C A C G A T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T