Information for 5-TAAAAGAACA (Motif 6)

A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A
Reverse Opposite:
C G A T T C A G G A C T A C G T A G T C G A C T C A G T G C A T C G A T T G C A
p-value:1e-17
log p-value:-4.130e+01
Information Content per bp:1.657
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif9.97%
Number of Background Sequences with motif1360.5
Percentage of Background Sequences with motif3.00%
Average Position of motif in Targets55.0 +/- 26.8bp
Average Position of motif in Background51.0 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAAAAGAACA---
-AAACAAACATTC
 A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAAAAGAACA-
-CCAGGAACAG
 A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGAACA---
CAAACAACAACACCT
 A C G T A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAAAAGAACA--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAAAAGAACA-----
AAAAATAACAAACGG
 A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGAACA----
AACAAACAACAAGAG
 A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAAAAGAACA----
NTTNAGAACAATTA
 A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGAACA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGAACA
GNCTATAAAAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGAACA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T G C T A C G T A G T C A C T G A T C A G T G C A C T G A A G T C G C T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G