Information for 21-CCTAGTGAATACA (Motif 27)

A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A A G T C C A G T C G T A A C T G A T C G
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 21.5bp
Average Position of motif in Background62.4 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTAGTGAATACA
ACTAGTTAAC---
 A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTAGTGAATACA----
-GGACTGAATTCATGCC
 A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAGTGAATACA
GCTCGTAAAAA--
 A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTAGTGAATACA
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGTGAATACA--
NNNTATTGAATTGNNN
 A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTAGTGAATACA
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCTAGTGAATACA
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGTGAATACA-
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGTGAATACA
ANTCCCTNGGGAAT---
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCTAGTGAATACA
----GTAAACA--
 A T G C A G T C A C G T G T C A A C T G A C G T C T A G C G T A C G T A A C G T C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T