Information for 18-TTGGGTCYTTGCY (Motif 23)

A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
Reverse Opposite:
C T A G C T A G A T G C C G T A C G T A C T A G A C T G G T C A G T A C A G T C A G T C C G T A C G T A
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.7 +/- 28.0bp
Average Position of motif in Background66.6 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGGTCYTTGCY-
TTGGCATGGTGCCA
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTCYTTGCY
NRRGGGTCTT----
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGGGTCYTTGCY--
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGGGTCYTTGCY
--GGGGATTTCC-
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGGGTCYTTGCY
-NGGGGATTTCCC
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGGGTCYTTGCY
--GGGGATTTCC-
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGGTCYTTGCY
-BNTGDCCTTG--
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTGGGTCYTTGCY
AGAGCGGGGTCAAGTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTGGGTCYTTGCY---
--AGGTCANTGACCTN
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C A C G T A C G T A C G T
A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTGGGTCYTTGCY
CCTTTGATCTTT---
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C G T A C G T A T C G A G T C G A T C
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T