Information for 17-GTTTATTSATTCA (Motif 21)

A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G A T T A G C C T G A C G T A A C G T C T G A G T C A C G T A G T A C
p-value:1e-10
log p-value:-2.409e+01
Information Content per bp:1.796
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif47.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.8 +/- 26.2bp
Average Position of motif in Background46.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTTATTSATTCA----
-NNCATTCATTCATNNN
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTTATTSATTCA-
NTTGATTNNATCAN
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTTTATTSATTCA
TATTGTTTATT------
 A C G T A C G T A C G T A C G T A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTTTATTSATTCA-
----ATTGATTYND
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTTATTSATTCA
GHATATKCAT---
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTTATTSATTCA
TTTTATGGCTN--
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTTATTSATTCA
TGTTTATTT-----
 A C G T A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTTATTSATTCA
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTTATTSATTCA
TTTTATTGC----
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTTTATTSATTCA
--NTATYGATCH-
 A C T G A C G T C A G T A G C T T C G A A C G T A G C T A T C G G C T A C G A T G A C T A G T C C G T A
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T