Information for 10-CAGTTTACTTTCT (Motif 16)

A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C G T A C G T A C T A G G A C T G T C A G T C A C T G A A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.4 +/- 29.7bp
Average Position of motif in Background47.8 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGTTTACTTTCT
-ACTTTCGTTTCT
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTTTACTTTCT-
CAGTTTCGNTTCTN
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTACTTTCT-
NNAGATNVNWATCTN
 A C G T A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGTTTACTTTCT--
-AGATTCTTATCTGT
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T A C G T A C G T
A C G T C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGTTTACTTTCT
-TGTTTACTTT--
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGTTTACTTTCT
-TGTTTACTTT--
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAGTTTACTTTCT
-----YSTTATCT
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTACTTTCT
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTTTACTTTCT
-AGTTTCAKTTTC
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGTTTACTTTCT
-----TCTTATCT
 A G T C C G T A A C T G A G C T A C G T A C G T C T G A A G T C A C G T C G A T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T