Information for 9-CAWCATKYMTCCA (Motif 12)

A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T G A A C T G C T G A G T A C C G T A A C G T A T C G C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.8 +/- 18.7bp
Average Position of motif in Background46.2 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CAWCATKYMTCCA-
--------ATCCAC
 A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAWCATKYMTCCA----
-NNCATTCATTCATNNN
 A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAWCATKYMTCCA
TCACCCATCAATAAACA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAWCATKYMTCCA-
---AATGTATCAAT
 A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAWCATKYMTCCA
ATTGCATCAT-------
 A C G T A C G T A C G T A C G T A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAWCATKYMTCCA
ATTGCATCAK-------
 A C G T A C G T A C G T A C G T A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAWCATKYMTCCA-
CATTAATTATTCAT
 A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAWCATKYMTCCA--
GACCACATTCATACAAT
 A C G T A C G T A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAWCATKYMTCCA
ATGACATCATCNN----
 A C G T A C G T A C G T A C G T A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAWCATKYMTCCA--
-----ATTTTCCATT
 A G T C C G T A C G A T A T G C C G T A A C G T A C T G A G C T T G A C A G C T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T