Information for 6-AGGACAAACA (Motif 8)

C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
Reverse Opposite:
A G C T C T A G C A G T G C A T C G A T C T A G C A G T A G T C G A T C G C A T
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.587
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif305.9
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets52.3 +/- 24.6bp
Average Position of motif in Background48.2 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGGACAAACA
GGAACAAAGR
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGACAAACA
AAAACAAAGG
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGACAAACA
-AAATAAACA
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGGACAAACA----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGACAAACA
RNAACAATGG
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGACAAACA---
-AAACAAACATTC
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGACAAACA----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGACAAACA
AAAACAATGG
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGGACAAACA
WAAGTAAAYA
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGGACAAACA
---GTAAACA
 C G T A C T A G T C A G G T C A G A T C G C T A C G T A G T C A G A T C T C G A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A