Information for 4-TTAGCTRGCKAAGTGC (Motif 7)

A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
Reverse Opposite:
T A C G A G T C C G T A A G T C A G C T A C G T G T C A A C T G A G T C A G C T C T G A A T C G A G T C A C G T C G T A C G T A
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.790
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 29.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTAGCTRGCKAAGTGC-
--------TTAAGTGGN
 A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TTAGCTRGCKAAGTGC-
--------TTAAGTGGT
 A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TTAGCTRGCKAAGTGC
--------TTAAGTGC
 A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTAGCTRGCKAAGTGC-----
----NTNNTTAAGTGGTTANN
 A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCTRGCKAAGTGC
NTNNTTAAGTGGNTNAN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TTAGCTRGCKAAGTGC-
-------NTCAAGTGGN
 A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGCTRGCKAAGTGC
NNCAATTANN-----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCTRGCKAAGTGC
GANGTTAACTAGTTTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.48
Offset:-7
Orientation:forward strand
Alignment:-------TTAGCTRGCKAAGTGC
AGGGGGATTAGCTGCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:10
Score:0.48
Offset:-8
Orientation:reverse strand
Alignment:--------TTAGCTRGCKAAGTGC
ANCGCTAATTAGCGGTN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T C T G A A C T G T A G C C A G T C G T A C T G A C T A G C G A T A C T G A T G C
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T