Information for 3-GAACAGAACG (Motif 3)

A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G
Reverse Opposite:
A G T C A C T G A G C T A C G T A T G C G A C T A T C G G A C T A G C T T G A C
p-value:1e-21
log p-value:-5.027e+01
Information Content per bp:1.655
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif11.64%
Number of Background Sequences with motif1556.6
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets51.2 +/- 26.0bp
Average Position of motif in Background50.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAACG
TGGAACAGMA--
 A C G T A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GAACAGAACG
CCAGGAACAG----
 A C G T A C G T A C G T A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACAGAACG-----
GRACAGWMTGTYCTB
 A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

POL001.1_MTE/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAACAGAACG-----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAACAGAACG-
-AACAGGAAGT
 A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAACG
CGGAAGTGAAAC
 A C G T A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAACAGAACG-----
GVACAGNMTGTYCTB
 A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T A C G T A C G T A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAACAGAACG-
GGAAGTGAAAST
 A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACAGAACG-
GCAAAACATTACTA
 A C G T A C G T A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAACAGAACG-
GRAASTGAAAST
 A C G T A C T G T C G A C T G A T A G C C T G A T A C G T G C A T C G A T G A C T C A G A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T