Information for 9-CAGAGCACGTCTC (Motif 16)

A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
Reverse Opposite:
A T C G C G T A A C T G C G T A G T A C A C T G A C G T A C T G A T G C A G C T A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.5 +/- 22.6bp
Average Position of motif in Background50.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
----GCACGTAY-
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGAGCACGTCTC-
----GCACGTACCC
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
----GCACGTNC-
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
---BGCACGTA--
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGAGCACGTCTC----
----GCACGTGTCNNNN
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGAGCACGTCTC
---GGCACGTGTC
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGAGCACGTCTC
---GGCACGTGNC
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGAGCACGTCTC
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGAGCACGTCTC
---ACCACTTGAA
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGAGCACGTCTC
----GCACGTGT-
 A G T C C G T A A T C G C T G A A T C G A G T C C G T A G T A C C A T G A C G T G T A C C G A T A T G C
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T