Information for 8-CACTCTGCCC (Motif 12)

T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C
Reverse Opposite:
A C T G A T C G A T C G G T A C C G T A T C A G C G T A A C T G C G A T A C T G
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.833
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif308.0
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets47.0 +/- 28.3bp
Average Position of motif in Background52.2 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CACTCTGCCC---
----CTGCCCGCA
 T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CACTCTGCCC---
----ATGCCCACC
 T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTGCCC---
TGACCTTTGCCCTAN
 A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACTCTGCCC
MRSCACTYAA---
 A C G T A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTGCCC--
TGACCTTTGCCCTA
 A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACTCTGCCC
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACTCTGCCC---
-GCTCCGCCCMCY
 T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACTCTGCCC------
TCACCCCGCCCCAAATT
 A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTGCCC----
TGGACTTTGNNCTNTG
 A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTGCCC---
TGGACTTTGNNCTCN
 A C G T A C G T T G A C C G T A G T A C G C A T A G T C C G A T A C T G A T G C T A G C G T A C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T