Information for 8-GAGAAGAATTYGTAAA (Motif 8)

A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T T C G A A G T C C T A G C G T A G T C A A C G T A C G T A T G C G C A T A C G T A G T C A C G T A G T C
p-value:1e-16
log p-value:-3.715e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.7 +/- 24.6bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA-
-ATGGAAAGTCGTAAAA
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T
A C G T C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA--
-------AGTCGTAAAAA
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA--
-------GGTCGTAAAAA
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA----
----TAAAGTCGTAAAACAT
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA----
----TAAAGTCGTAAAATAG
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA----
----TAAAGTCGTAAAACGT
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA--
--------GTCGTAAAAA
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GAGAAGAATTYGTAAA
TATAGAGATAAGAATTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GAGAAGAATTYGTAAA--
-------GGTCGTAAAAT
 A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGAAGAATTYGTAAA
TTAAGAACAATAAATT--
 A C G T A C G T A C T G C G T A T C A G C G T A C G T A A T C G G T C A G T C A A C G T C G A T G A T C A C T G A G C T C G T A C G T A C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T