Information for 13-ACGGATATCC (Motif 28)

G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C T G C A G T
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 27.5bp
Average Position of motif in Background57.6 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ACGGATATCC-
AAGGATATNTN
 G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACGGATATCC-----
NNNCTGATATCTCNNNN
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGGATATCC-----
AATAGGGTATCATATAT
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGGATATCC-----
AATAGGGTATCAATATT
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGGATATCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACGGATATCC--
--GGAAATTCCC
 G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGGATATCC-----
GATAGGGTATCACTAAT
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGGATATCC-----
GATAGGGTATCACTAAT
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACGGATATCC--
--GGAAANCCCC
 G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACGGATATCC
NDCAGGAARTNN
 A C G T A C G T G C T A G T A C A C T G A C T G C G T A A C G T C G T A A C G T A G T C A G T C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G