Information for 22-GCCGGTCTCTTTT (Motif 25)

A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 31.6bp
Average Position of motif in Background38.8 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT---
--CAGTTTCGNTTCTN
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT------
----TTCTATTTTTAGNNN
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT
GCCGCCATCTTG-
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGTCTCTTTT--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT----
-----KCTATTTTTRGH
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCCGGTCTCTTTT-
--AGGTCTCTAACC
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCCGGTCTCTTTT--
---AGTTTCAKTTTC
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCCGGTCTCTTTT---
-TCAGTTTCATTTTCC
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT---
------CTATTTTTGG
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCCGGTCTCTTTT---
-NTGGTTTCGGTTNNN
 A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T