Information for 7-CAAAGTACAY (Motif 14)

G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T
Reverse Opposite:
C T G A C G A T C T A G A C G T C T G A A T G C A G C T A C G T C A G T A C T G
p-value:1e-12
log p-value:-2.989e+01
Information Content per bp:1.781
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif213.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets43.0 +/- 18.9bp
Average Position of motif in Background52.2 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGTACAY-----
TTCNAAGTACTTNNNNN
 A C G T A C G T G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTACAY-----
TACTAAGTACTTAAATG
 A C G T A C G T G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAAAGTACAY-
-AAACCACANN
 G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAAGTACAY
NAAACCACAG
 G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CAAAGTACAY--
--AAGCACTTAA
 G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTACAY
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAAGTACAY--
NWAACCACADNN
 G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTACAY-----
TTTTAAGTACTTAAATT
 A C G T A C G T G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGTACAY----
CNTTAAGTACTTAANG
 A C G T A C G T G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAAAGTACAY-
-AAACCACAGC
 G T A C G T C A C G T A C T G A A T C G G A C T C G T A A G T C C G T A A G C T A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C