Information for 21-TTACTTGCTGGCA (Motif 29)

G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C T G C G A T C G T A C G T A
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.925
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 11.6bp
Average Position of motif in Background16.3 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ATTNNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ATTNNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTTGCTGGCA
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTACTTGCTGGCA-
-----GGTTGGCAT
 G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TTACTTGCTGGCA-
------CTTGGCAA
 G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTACTTGCTGGCA----
AAATTTGCTGACTTAGA
 G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTACTTGCTGGCA-
-----TNNGGGCAG
 G A C T A C G T C G T A A G T C A G C T A C G T A C T G A G T C A C G T C T A G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G