Information for 11-KGTYSAGGARAGA (Motif 13)

A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
Reverse Opposite:
C G A T A G T C A C G T G A C T A C G T A G T C A G T C A C G T A T C G C T G A C G T A A G T C G T C A
p-value:1e-12
log p-value:-2.793e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 21.0bp
Average Position of motif in Background65.3 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---KGTYSAGGARAGA
NGCTTTCTAGGAAN--
 A C G T A C G T A C G T A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----KGTYSAGGARAGA
NNNCTTTCCAGGAAA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGTYSAGGARAGA
--NACAGGAAAT-
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGTYSAGGARAGA
TTTCCAGGAAA--
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KGTYSAGGARAGA-
--NDCAGGAARTNN
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:KGTYSAGGARAGA
---AGAGGAA---
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:KGTYSAGGARAGA----
-----AGGAAACAGCTG
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--KGTYSAGGARAGA-
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KGTYSAGGARAGA
NTTTCCNGGAAA--
 A C G T A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:KGTYSAGGARAGA-
TTTCCAGGAAATGG
 A C G T A C T G A C G T A G C T A T G C C G T A A C T G A C T G C G T A C T G A C G T A C T A G C G T A A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G