Information for 3-CGGATCCTYCAGG (Motif 7)

A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
Reverse Opposite:
A T G C A G T C A G C T A C T G T C A G T G C A A C T G A T C G G C T A C G A T A G T C A G T C T A C G
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets32.0 +/- 22.0bp
Average Position of motif in Background53.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CGGATCCTYCAGG
AANNATCCGGATGTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGATCCTYCAGG
ACCGGAAGTG-----
 A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGATCCTYCAGG
CGGAGC-------
 A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGATCCTYCAGG
NGGATTAN-----
 A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGATCCTYCAGG
DCCGGAARYN-----
 A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGATCCTYCAGG
RCCGGAARYN-----
 A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CGGATCCTYCAGG
ANCAGGATGT------
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGGATCCTYCAGG
-GGACCACCCACG
 A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CGGATCCTYCAGG
AGGAAACAGCTG-
 A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CGGATCCTYCAGG
RCCGGAAGTD-----
 A C G T A C G T A G T C A C T G A C T G C G T A C G A T A T G C G T A C A C G T A G T C G T A C C T G A A C T G A T C G
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T