Information for 19-CCGCTAGAGCGGC (Motif 34)

G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A T C G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.865e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 27.9bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGCTAGAGCGGC-
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGCTAGAGCGGC
GRTGMTRGAGCC--
 A C G T G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGCTAGAGCGGC-
---CTTGAGTGGCT
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CCGCTAGAGCGGC
NAGNTCTCGCGAGAN----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCGCTAGAGCGGC
---BTBRAGTGSN
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCGCTAGAGCGGC
---CTYRAGTGSY
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCGCTAGAGCGGC
GCGCATGCGCAG-
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCGCTAGAGCGGC
GCGCCTGCGCA--
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCGCTAGAGCGGC
GGNTCTCGCGAGAAC---
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CCGCTAGAGCGGC-
----TTGAGTGSTT
 G T A C A G T C A C T G A G T C A C G T C G T A A C T G G T C A A C T G A T G C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T