Information for 2-CAAAATGGCG (Motif 2)

G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G G T A C A G T C C G T A A C G T A G C T G A C T A C G T C A T G
p-value:1e-18
log p-value:-4.225e+01
Information Content per bp:1.839
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif419.5
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets49.5 +/- 27.5bp
Average Position of motif in Background52.7 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CAAAATGGCG--
CAAGATGGCGGC
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CAAAATGGCG--
CAAGATGGCGGC
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CAAAATGGCG---
--TAATGGCGGNC
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAAATGGCG-------
-AAAATGGCGCCATTTT
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAAATGGCG--------
AAAAATGGCGCCATTTTT
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAAATGGCG-------
NAGANTGGCGGGGNGNA
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAAATGGCG---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAAAATGGCG-
---GATGACGT
 G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAATGGCG-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CAAAATGGCG
ARGAGGMCAAAATGW--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T G A T C G A C G T A A C G T A C T G A C T G A G T C A T C G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T