Information for 8-YMCCCTGMTTGRG (Motif 9)

A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C G A C T A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C T A G A C T G C T G A
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 28.3bp
Average Position of motif in Background52.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG
----TTGATTGN-
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG------
----CTGATTGGTCNATTT
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-YMCCCTGMTTGRG---
NNNNGTTGATTGGGTCG
 A C G T A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG
CCCCCTGCTGTG-
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YMCCCTGMTTGRG---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG
--CNGTGATTTN-
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG
---GNTAATTGGN
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
A C G T A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG-
----CCGATTGGCT
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:YMCCCTGMTTGRG--
---TTTGATTGATGN
 A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YMCCCTGMTTGRG
GGCCYCCTGCTGDGH
 A C G T A C G T A G C T T G A C A G T C A G T C A G T C A C G T A C T G G T C A A C G T A C G T A C T G C T G A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C