Information for 12-CACAATGACT (Motif 15)

G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
Reverse Opposite:
C G T A C T A G C G A T A G T C C G T A C G A T A C G T T C A G A C G T A C T G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.847
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif239.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets44.5 +/- 23.9bp
Average Position of motif in Background51.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACAATGACT
GACAATGNN-
 G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CACAATGACT-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CACAATGACT
-ACAAAG---
 G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGACT
VRRACAAWGG--
 A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CACAATGACT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CACAATGACT
RAACAATGGN-
 A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGACT
VRAACAATGG--
 A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGACT
RNAACAATGG--
 A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CACAATGACT
---CATGAC-
 G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CACAATGACT--
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A C G T A A C G T C T A G C G T A G A T C C G A T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T