Information for 12-GCTGGAAGACAGG (Motif 11)

A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C G T A T G C A G T C C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.6 +/- 6.6bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAAGACAGG
AGGTGNCAGACAG-
 A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAGACAGG
AGGTGHCAGACA--
 A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTGGAAGACAGG
GGGCGGGAAGG----
 A C G T A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGGAAGACAGG-
--TGAGTGACAGSC
 A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAGACAGG
GGCGGGAARN----
 A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGGAAGACAGG
--TGGAAAA----
 A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTGGAAGACAGG
GGGCGGGAAGG----
 A C G T A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAAGACAGG
CWGGCGGGAA------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGAAGACAGG
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAAGACAGG
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A T C G C G T A C T G A A C T G C T G A A G T C C G T A A C T G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T