Information for 4-TGTTTGSTTTGGC (Motif 5)

A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
Reverse Opposite:
A T C G A G T C A G T C C G T A C G T A C G T A T A G C A G T C G T C A G T C A C G T A A G T C C G T A
p-value:1e-14
log p-value:-3.302e+01
Information Content per bp:1.804
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif19.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.3 +/- 28.8bp
Average Position of motif in Background34.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TGTTTGSTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGSTTTGGC--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTTGSTTTGGC
TRTTTACTTW---
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTTTGSTTTGGC
TGTTTACTTAGG-
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:8
Orientation:forward strand
Alignment:TGTTTGSTTTGGC-
--------TTGGCA
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTTTGSTTTGGC
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTTGSTTTGGC
TGTTTACTTT---
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTTGSTTTGGC
TGTTTACTTT---
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGSTTTGGC
GAATGTTTGTTT----
 A C G T A C G T A C G T A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TGTTTGSTTTGGC---
-------NTTGGCANN
 A C G T T A C G A C G T A C G T C A G T A C T G A T C G G A C T A C G T A C G T A C T G A C T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G