Information for 18-GGCTGCCGAACAG (Motif 24)

A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 20.9bp
Average Position of motif in Background16.6 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCCGAACAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCTGCCGAACAG-
GAATGACGAATAAC
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCTGCCGAACAG
GSCTGTCACTCA-
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCGAACAG
NGCTN--------
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCCGAACAG-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCTGCCGAACAG
-SCTGTCAVTCAV
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCGAACAG--
GGGCGATGACCAYTC
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCCGAACAG
TWGTCTGV-------
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGCCGAACAG
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGCTGCCGAACAG
-NCTGTCAATCAN
 A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G C G T A C G T A A G T C C G T A A C T G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A