Information for 2-TGGCGCCAGS (Motif 2)

G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C
Reverse Opposite:
A T C G T A G C A G C T A C T G A C T G G A T C C T A G A G T C A G T C C G T A
p-value:1e-27
log p-value:-6.401e+01
Information Content per bp:1.699
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif17.79%
Number of Background Sequences with motif3203.1
Percentage of Background Sequences with motif6.70%
Average Position of motif in Targets49.7 +/- 24.3bp
Average Position of motif in Background50.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----TGGCGCCAGS---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----TGGCGCCAGS---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TGGCGCCAGS
TTTGGCGCCAAA
 A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGCGCCAGS
AGCGCGCC---
 A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGGCGCCAGS--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGGCGCCAGS--
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGCGCCAGS
-CGTGCCAAG
 G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCGCCAGS---
-GGCTCYAKCAYC
 G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T A C G T
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGGCGCCAGS---
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGGCGCCAGS
---TGCCAA-
 G C A T A C T G T C A G G A T C C T A G A G T C A G T C T C G A A T C G T A G C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T