Information for 13-AGCTSCCWGCATC (Motif 17)

C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
Reverse Opposite:
A T C G C G T A C G A T A T C G A G T C C G T A A T C G A T C G A T C G C T G A A C T G A G T C G A C T
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.845
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.6 +/- 27.5bp
Average Position of motif in Background52.0 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCTSCCWGCATC
-GCTCCG------
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCTSCCWGCATC
---TACCCGCATN
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCTSCCWGCATC
CAGCC---------
 A C G T C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCTSCCWGCATC
--GTACCCGCATN
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCTSCCWGCATC--
ATTTCCCAGVAKSCY
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCTSCCWGCATC
ACTTGCTACCTACACC
 A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCTSCCWGCATC---
TCGTACCCGCATCATT
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGCTSCCWGCATC-----
---TGCCTGCGYCMCCTT
 C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGCTSCCWGCATC
NNGCAGCTGTC------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTSCCWGCATC
NNAGCAGCTGCT------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G C T A T G C A T G C A T G C C G A T A C T G A T G C C G T A A C G T A T G C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T