Information for 13-ACAAATCACT (Motif 16)

C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
Reverse Opposite:
C G T A A T C G A C G T A T C G G C T A A C G T A C G T A C G T C T A G C G A T
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif64.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.9 +/- 21.7bp
Average Position of motif in Background52.2 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ACAAATCACT-
-CAAATCACTG
 C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACAAATCACT
HNRAATCAAT
 C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACAAATCACT
GGCCATAAATCAC-
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAAATCACT---
--AAATCACAGCA
 C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAAATCACT---
AAAAAATCAATAAT
 A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAAATCACT--
--AAATCACTGC
 C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T A C G T A C G T
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAAATCACT
GGCCATAAATCA--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACAAATCACT
GCCATAAATCA--
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACAAATCACT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACAAATCACT----
AATCAATTCAATAATT
 A C G T A C G T C G T A A G T C C G T A C G T A T G C A C G A T A T G C C G T A T A G C A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T