Information for 10-GGGAGACAGCTTT (Motif 10)

A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
Reverse Opposite:
C T G A C T G A G C T A A T C G A G T C C G A T A C T G A G C T A T G C A C G T A T G C A G T C A G T C
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.9 +/- 16.4bp
Average Position of motif in Background47.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGACAGCTTT
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGAGACAGCTTT
----CACAGN---
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGAGACAGCTTT
-CCAGACAG----
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGAGACAGCTTT
AGGAAACAGCTG-
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGAGACAGCTTT
AGGTGHCAGACA-----
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGAGACAGCTTT
-CCAGACRSVB--
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGAGACAGCTTT--
-----ACAGCTGTTV
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGAGACAGCTTT-
-NGNGACAGCTGCN
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGAGACAGCTTT
AGGGTAACAGC---
 A C G T A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGAGACAGCTTT-
------CAGCTGTT
 A C T G A C T G A T C G C G T A A T C G C T G A A G T C C G T A A C T G A T G C C A G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T