Information for 1-AGGCTGGAAGTCC (Motif 2)

C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G G T C A A T G C A C G T C G A T A G T C A G T C C T G A C T A G A G T C G T A C A C G T
p-value:1e-11
log p-value:-2.663e+01
Information Content per bp:1.864
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 24.8bp
Average Position of motif in Background56.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGGAAGTCC
CWGGCGGGAA----
 A C G T C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGCTGGAAGTCC
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCTGGAAGTCC
-GGTTGGCAT---
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCTGGAAGTCC
GGGCGGGAAGG--
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGCTGGAAGTCC
-GGCGGGAARN--
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCTGGAAGTCC
GGGCGGGAAGG--
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGGCTGGAAGTCC
--NCCGGAAGTGG
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGGAAGTCC
TWGTCTGV------
 A C G T C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCTGGAAGTCC
-NACCGGAAGT--
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGCTGGAAGTCC
TGGCGGGAAAHB-
 C G T A A C T G A C T G A G T C A G C T A C T G A C T G C G T A C G T A A T C G A C G T A T G C A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T