Information for 10-GCGCCATGGCGCT (Motif 14)

A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
Reverse Opposite:
T C G A A C T G A G T C A C T G A T G C A T G C G T C A C A G T A C T G A C T G G T A C A T C G A T G C
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.782
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.9 +/- 33.2bp
Average Position of motif in Background49.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGCCATGGCGCT
GTCCGCCATTA----
 A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCCATGGCGCT
NNNNTTGGCGCCGANNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCGCCATGGCGCT
AGCGCGCC--------
 A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATGGCGCT
ANCGCGCGCCCTTNN---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCGCCATGGCGCT
NGTTGCCATGGCAA-
 A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCGCCATGGCGCT
CCTTCGGCGCCAAAAGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATGGCGCT
NTCGCGCGCCTTNNN---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGCCATGGCGCT
TTTGGCGCCAAA-----
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCGCCATGGCGCT
----NTTGGCANN
 A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGCCATGGCGCT
TGCCCCCGGGCA--
 A C G T A T C G A T G C A C T G A G T C A G T C G T C A A C G T A T C G A T C G G T A C T A C G A G T C A G C T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T