Information for 1-GAAAGGCGTT (Motif 1)

A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T
Reverse Opposite:
G T C A G T C A G T A C A C T G A G T C A G T C A C G T A C G T A G C T G T A C
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.9 +/- 28.2bp
Average Position of motif in Background54.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAAGGCGTT-----
CAAAGGCGTGGCCAG
 A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0136.1_IRC900814_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGCGTT---
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGCGTT-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAAGGCGTT-
TAATGGCGGNC
 A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGGCGTT---
AGGGAAGTCATTTCT
 A C G T A C G T A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAAAGGCGTT-
---AGGCCTNG
 A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAGGCGTT---
-TAAGGCGTCTTG
 A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGCGTT-----
GCGGAGGTGTCGCCTC
 A C G T A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0046.1_Mybl1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGCGTT-----
TTGAAAACCGTTAATTT
 A C G T A C G T A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAAAGGCGTT-
---AGGTGTGA
 A C T G C T G A C G T A G T C A C T A G A C T G A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A