p-value: | 1e-7 |
log p-value: | -1.718e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.71% |
Number of Background Sequences with motif | 10.4 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 38.7 +/- 26.7bp |
Average Position of motif in Background | 53.1 +/- 32.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YKGYCATGRCAAM- TTGCCATGGCAACC |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YKGYCATGRCAAM- TTGCCATGGCAACN |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 3 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --YKGYCATGRCAAM KGTTGCCATGGCAAC |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 4 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -YKGYCATGRCAAM-- GTTGCCATGGCAACCG |
|
|
|
Rfx1/MA0509.1/Jaspar
Match Rank: | 5 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -YKGYCATGRCAAM GTTGCCATGGCAAC |
|
|
|
RFX2/MA0600.2/Jaspar
Match Rank: | 6 |
Score: | 0.78 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --YKGYCATGRCAAM- CGTTGCCATGGCAACG |
|
|
|
RFX5/MA0510.2/Jaspar
Match Rank: | 7 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --YKGYCATGRCAAM- NGTTGCCATGGCAACG |
|
|
|
RFX3/MA0798.1/Jaspar
Match Rank: | 8 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --YKGYCATGRCAAM- CGTTGCCATGGCAACG |
|
|
|
RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --YKGYCATGRCAAM- CGTTGCCATGGCAACG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YKGYCATGRCAAM--- -TACCATAGCAACGGT |
|
|
|